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Test testInternalCopyPaste

Test
testInternalCopyPaste 1PASS 6 Dec 13:48:47 0.16
 
testInternalCopyPaste
jalview.io.DataSourceType   jalview.io.DataSourceType 1.0100%
jalview.renderer.ScaleRenderer.ScaleMark   jalview.renderer.ScaleRenderer.ScaleMark 1.0100%
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.jbgui.GAlignmentPanel   jalview.jbgui.GAlignmentPanel 0.9494%
jalview.gui.SplashScreen.SplashImage   jalview.gui.SplashScreen.SplashImage 0.8823529588.2%
jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer   jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer 0.869565287%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.866995186.7%
jalview.json.binding.biojs.BioJSReleasePojo   jalview.json.binding.biojs.BioJSReleasePojo 0.8461538684.6%
jalview.datamodel.Profiles   jalview.datamodel.Profiles 0.833333383.3%
jalview.util.LinkedIdentityHashSet   jalview.util.LinkedIdentityHashSet 0.7727272577.3%
jalview.workers.SecondaryStructureConsensusThread   jalview.workers.SecondaryStructureConsensusThread 0.7333333573.3%
jalview.gui.FeatureRenderer   jalview.gui.FeatureRenderer 0.7142857371.4%
jalview.util.LinkedIdentityHashSet.IdentityWrapper   jalview.util.LinkedIdentityHashSet.IdentityWrapper 0.7142857371.4%
jalview.ws.jws2.jabaws2.Jws2InstanceFactory   jalview.ws.jws2.jabaws2.Jws2InstanceFactory 0.770%
jalview.workers.ConsensusThread   jalview.workers.ConsensusThread 0.696969769.7%
jalview.json.binding.biojs.BioJSRepositoryPojo   jalview.json.binding.biojs.BioJSRepositoryPojo 0.687568.8%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 0.678571467.9%
jalview.datamodel.Profile   jalview.datamodel.Profile 0.672131167.2%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.643678264.4%
jalview.io.FastaFile   jalview.io.FastaFile 0.612612661.3%
jalview.jbgui.GAlignFrame   jalview.jbgui.GAlignFrame 0.57354357.4%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.568965556.9%
jalview.renderer.ScaleRenderer   jalview.renderer.ScaleRenderer 0.5656%
jalview.ws.sifts.SiftsSettings   jalview.ws.sifts.SiftsSettings 0.555555655.6%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.550%
jalview.viewmodel.ViewportProperties   jalview.viewmodel.ViewportProperties 0.550%
jalview.urls.IdOrgSettings   jalview.urls.IdOrgSettings 0.550%
jalview.schemes.TaylorColourScheme   jalview.schemes.TaylorColourScheme 0.550%
jalview.schemes.FlowerColourScheme   jalview.schemes.FlowerColourScheme 0.550%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 0.550%
jalview.schemes.NucleotideAmbiguityColourScheme   jalview.schemes.NucleotideAmbiguityColourScheme 0.550%
jalview.schemes.PurinePyrimidineColourScheme   jalview.schemes.PurinePyrimidineColourScheme 0.550%
jalview.schemes.NucleotideColourScheme   jalview.schemes.NucleotideColourScheme 0.550%
jalview.schemes.BlossomColourScheme   jalview.schemes.BlossomColourScheme 0.550%
jalview.schemes.SunsetColourScheme   jalview.schemes.SunsetColourScheme 0.550%
jalview.schemes.OceanColourScheme   jalview.schemes.OceanColourScheme 0.550%
jalview.ws.jws2.JabaWsServerQuery   jalview.ws.jws2.JabaWsServerQuery 0.4791666647.9%
jalview.io.JalviewFileChooser.RecentlyOpened   jalview.io.JalviewFileChooser.RecentlyOpened 0.4666666746.7%
jalview.io.BioJsHTMLOutput   jalview.io.BioJsHTMLOutput 0.46446.4%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.4583333445.8%
jalview.gui.SplashScreen   jalview.gui.SplashScreen 0.4415584544.2%
jalview.io.FileLoader   jalview.io.FileLoader 0.4414715844.1%
jalview.gui.ColourMenuHelper   jalview.gui.ColourMenuHelper 0.4322033843.2%
jalview.ws.utils.UrlDownloadClient   jalview.ws.utils.UrlDownloadClient 0.4285714342.9%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
jalview.util.ShortcutKeyMaskExWrapper11   jalview.util.ShortcutKeyMaskExWrapper11 0.4166666641.7%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.409090940.9%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.4086538640.9%
jalview.datamodel.RangeIterator   jalview.datamodel.RangeIterator 0.405405440.5%
jalview.io.FileFormats   jalview.io.FileFormats 0.440%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.440%
jalview.schemes.HydrophobicColourScheme   jalview.schemes.HydrophobicColourScheme 0.440%
jalview.schemes.HelixColourScheme   jalview.schemes.HelixColourScheme 0.440%
jalview.schemes.TurnColourScheme   jalview.schemes.TurnColourScheme 0.440%
jalview.schemes.StrandColourScheme   jalview.schemes.StrandColourScheme 0.440%
jalview.schemes.BuriedColourScheme   jalview.schemes.BuriedColourScheme 0.440%
jalview.io.AlignFile   jalview.io.AlignFile 0.3972602839.7%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.388888938.9%
org.json.simple.parser.Yylex   org.json.simple.parser.Yylex 0.3853503238.5%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.3745454537.5%
jalview.util.MessageManager   jalview.util.MessageManager 0.3571428735.7%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.3571428735.7%
jalview.util.Comparison   jalview.util.Comparison 0.350393735%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.348993334.9%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.3369565333.7%
jalview.analysis.AAFrequency   jalview.analysis.AAFrequency 0.3333333433.3%
jalview.gui.PaintRefresher   jalview.gui.PaintRefresher 0.3239436732.4%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.31531.5%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.3135313431.4%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.299175529.9%
org.json.simple.parser.JSONParser   org.json.simple.parser.JSONParser 0.2945544429.5%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.2899543329%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.285714328.6%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.285714328.6%
jalview.schemes.JalviewColourScheme   jalview.schemes.JalviewColourScheme 0.285714328.6%
jalview.io.IdentifyFile   jalview.io.IdentifyFile 0.279365127.9%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.273684227.4%
jalview.io.FileParse   jalview.io.FileParse 0.253481925.3%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.2532281325.3%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.2435897424.4%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.2430795924.3%
jalview.bin.Cache   jalview.bin.Cache 0.2382920123.8%
jalview.bin.BuildDetails   jalview.bin.BuildDetails 0.2352941223.5%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.2312925223.1%
jalview.io.FormatAdapter   jalview.io.FormatAdapter 0.2323%
jalview.io.JalviewFileFilter   jalview.io.JalviewFileFilter 0.226415122.6%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.223684222.4%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.2148437521.5%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.2099009921%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2056074720.6%
jalview.schemes.IdColourScheme   jalview.schemes.IdColourScheme 0.1739130517.4%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.1703910717%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.1674876816.7%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.1616%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.158878515.9%
jalview.datamodel.SequenceGroup   jalview.datamodel.SequenceGroup 0.1530898815.3%
jalview.util.Format   jalview.util.Format 0.1490683314.9%
jalview.schemes.TCoffeeColourScheme   jalview.schemes.TCoffeeColourScheme 0.1475409914.8%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.1458333314.6%
jalview.log.JLogger   jalview.log.JLogger 0.1428571514.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.1428571514.3%
jalview.bin.Console   jalview.bin.Console 0.1330049213.3%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.1315049213.2%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.12408759412.4%
jalview.io.FileFormat   jalview.io.FileFormat 0.1240310112.4%
jalview.util.StringUtils   jalview.util.StringUtils 0.1230769212.3%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.1219512212.2%
jalview.schemes.Blosum62ColourScheme   jalview.schemes.Blosum62ColourScheme 0.1176470611.8%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.11538461611.5%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.11538461611.5%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.11428571511.4%
jalview.structure.StructureImportSettings   jalview.structure.StructureImportSettings 0.11428571511.4%
jalview.gui.Desktop.MyDesktopManager   jalview.gui.Desktop.MyDesktopManager 0.1111111111.1%
jalview.util.ShortcutKeyMaskExWrapper   jalview.util.ShortcutKeyMaskExWrapper 0.1111111111.1%
jalview.schemes.ColourSchemeProperty   jalview.schemes.ColourSchemeProperty 0.1111111111.1%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.10937510.9%
jalview.log.JLoggerLog4j   jalview.log.JLoggerLog4j 0.10679611610.7%
jalview.gui.Desktop   jalview.gui.Desktop 0.1032917110.3%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.0993788849.9%
org.json.simple.parser.Yytoken   org.json.simple.parser.Yytoken 0.096774199.7%
jalview.util.ColorUtils   jalview.util.ColorUtils 0.096774199.7%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.09523819.5%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.093186379.3%
jalview.util.JSONUtils   jalview.util.JSONUtils 0.090909099.1%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.086956528.7%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.0843373468.4%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.0833333368.3%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.schemes.RNAHelicesColour   jalview.schemes.RNAHelicesColour 0.082191788.2%
jalview.gui.ProgressBar   jalview.gui.ProgressBar 0.081300818.1%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.080188688%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.077403257.7%
jalview.util.Platform   jalview.util.Platform 0.0707547147.1%
jalview.schemes.ColourSchemes   jalview.schemes.ColourSchemes 0.070175447%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.067264576.7%
jalview.schemes.PIDColourScheme   jalview.schemes.PIDColourScheme 0.066666676.7%
jalview.util.HttpUtils   jalview.util.HttpUtils 0.065359486.5%
jalview.analysis.CrossRef   jalview.analysis.CrossRef 0.063524596.4%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.0617283966.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.061224496.1%
jalview.gui.ViewSelectionMenu   jalview.gui.ViewSelectionMenu 0.059405945.9%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.0577777775.8%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.0540540555.4%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.0528586845.3%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.0512820525.1%
jalview.analysis.GeneticCodes   jalview.analysis.GeneticCodes 0.0496894425%
jalview.datamodel.SecondaryStructureCount   jalview.datamodel.SecondaryStructureCount 0.0468754.7%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.045317224.5%
jalview.gui.WsParamSetManager   jalview.gui.WsParamSetManager 0.0429447854.3%
jalview.gui.SeqPanel   jalview.gui.SeqPanel 0.042791314.3%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.042553194.3%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.0421455954.2%
org.json.simple.JSONObject   org.json.simple.JSONObject 0.037735853.8%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.0310559013.1%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.0309278353.1%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.027397262.7%
jalview.util.QuickSort   jalview.util.QuickSort 0.0194174761.9%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.0172651931.7%
jalview.schemes.ClustalxColourScheme   jalview.schemes.ClustalxColourScheme 0.0169491531.7%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0155642021.6%
jalview.controller.AlignViewController   jalview.controller.AlignViewController 0.0135593221.4%
jalview.datamodel.SearchResults   jalview.datamodel.SearchResults 0.0128205131.3%
jalview.analysis.AlignSeq   jalview.analysis.AlignSeq 0.0128205131.3%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.0127388541.3%
jalview.io.SequenceAnnotationReport   jalview.io.SequenceAnnotationReport 0.0122699381.2%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.0108932461.1%
jalview.bin.Jalview   jalview.bin.Jalview 0.0099277981%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0089285720.9%
jalview.bin.argparser.BootstrapArgs   jalview.bin.argparser.BootstrapArgs 0.0082644620.8%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.0081632650.8%
jalview.ext.jmol.JalviewJmolBinding   jalview.ext.jmol.JalviewJmolBinding 0.0080808080.8%
org.json.simple.JSONArray   org.json.simple.JSONArray 0.0080645160.8%
jalview.gui.QuitHandler   jalview.gui.QuitHandler 0.0077519380.8%
jalview.renderer.seqfeatures.FeatureRenderer   jalview.renderer.seqfeatures.FeatureRenderer 0.007547170.8%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.00357142860.4%