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mc_view.PDBChain
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mc_view.Bond
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com.stevesoft.pat.oneChar
com.stevesoft.pat.oneChar
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jalview.io.BioJsHTMLOutput
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org.json.simple.parser.Yylex
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jalview.gui.AppJmol
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jalview.util.Format
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jalview.datamodel.SequenceFeature
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jalview.io.AlignFile
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jalview.viewmodel.ViewportRanges
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jalview.gui.IdwidthAdjuster
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jalview.datamodel.features.SequenceFeatures
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jalview.datamodel.Sequence
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jalview.ws.jws1.Discoverer
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jalview.renderer.seqfeatures.FeatureColourFinder
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com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
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org.json.simple.parser.JSONParser
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jalview.gui.PaintRefresher
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ext.vamsas.ServiceHandle
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jalview.schemes.JalviewColourScheme
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jalview.io.IdentifyFile
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mc_view.Atom
mc_view.Atom
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com.stevesoft.pat.Or
com.stevesoft.pat.Or
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jalview.schemes.IdColourScheme
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jalview.datamodel.features.FeatureStore
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com.stevesoft.pat.Regex
com.stevesoft.pat.Regex
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0.250909125.1%
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jalview.gui.JalviewChangeSupport
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0.2525%
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jalview.renderer.AnnotationRendererFactory
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0.2525%
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jalview.ws.rest.params.Alignment
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jalview.gui.SeqCanvas
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jalview.datamodel.SequenceCursor
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jalview.structure.StructureCommandsBase
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jalview.gui.JvSwingUtils
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jalview.datamodel.SecondaryStructureCount
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0.2304687523%
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jalview.ext.jmol.JmolCommands
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com.stevesoft.pat.Range
com.stevesoft.pat.Range
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com.stevesoft.pat.Bracket
com.stevesoft.pat.Bracket
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jalview.gui.ScalePanel
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jalview.log.JalviewAppender
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jalview.gui.AnnotationLabels
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jalview.viewmodel.seqfeatures.FeaturesDisplayed
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jalview.gui.PromptUserConfig
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jalview.util.HttpUtils
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0.2156862821.6%
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jalview.io.FileParse
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jalview.analysis.scoremodels.ScoreModels
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0.2115384621.2%
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jalview.ws.rest.InputType
jalview.ws.rest.InputType
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0.2056074720.6%
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jalview.analysis.AnnotationSorter
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0.1970443319.7%
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jalview.io.JalviewFileChooser
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0.1955719619.6%
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jalview.datamodel.Alignment
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jalview.datamodel.SearchResults.Match
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jalview.gui.StructureViewer
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com.stevesoft.pat.patInt
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jalview.gui.AnnotationPanel
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jalview.ws.jws1.WS1Client
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jalview.util.Platform
jalview.util.Platform
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jalview.structure.AtomSpec
jalview.structure.AtomSpec
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jalview.ws.rest.params.SeqGroupIndexVector
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jalview.gui.AlignFrame
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jalview.structure.StructureCommand
jalview.structure.StructureCommand
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jalview.util.ColorUtils
jalview.util.ColorUtils
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jalview.ws.rest.RestClient
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jalview.bin.Console
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jalview.gui.BlogReader
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jalview.gui.Desktop.MyDesktopManager
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.ws.sifts.SiftsSettings
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jalview.schemes.ColourSchemeProperty
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jalview.schemes.RNAHelicesColour
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jalview.analysis.scoremodels.ScoreMatrix
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jalview.datamodel.DBRefEntry
jalview.datamodel.DBRefEntry
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jalview.ws.rest.params.AnnotationFile
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com.stevesoft.pat.parsePerl
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jalview.util.StringUtils
jalview.util.StringUtils
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org.json.simple.parser.Yytoken
org.json.simple.parser.Yytoken
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jalview.util.ChannelProperties
jalview.util.ChannelProperties
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jalview.workers.AlignCalcWorker
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jalview.io.FileFormat
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jalview.util.JSONUtils
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jalview.schemes.FeatureColour
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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jalview.ws.dbsources.Xfam
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jalview.renderer.ResidueShader
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jalview.gui.Desktop
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jalview.ws.dbsources.Pdb
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jalview.ext.ensembl.EnsemblSequenceFetcher
jalview.ext.ensembl.EnsemblSequenceFetcher
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jalview.gui.Console
jalview.gui.Console
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jalview.ws.seqfetcher.DbSourceProxyImpl
jalview.ws.seqfetcher.DbSourceProxyImpl
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jalview.urls.UrlProvider
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jalview.datamodel.ContactMapHolder
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jalview.datamodel.ColumnSelection.IntList
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com.stevesoft.pat.FastMulti
com.stevesoft.pat.FastMulti
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jalview.schemes.ColourSchemes
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jalview.gui.IdPanel
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jalview.log.JLogger
jalview.log.JLogger
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com.stevesoft.pat.RegOpt
com.stevesoft.pat.RegOpt
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jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
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jalview.analysis.CrossRef
jalview.analysis.CrossRef
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jalview.gui.ViewSelectionMenu
jalview.gui.ViewSelectionMenu
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jalview.ws.seqfetcher.ASequenceFetcher
jalview.ws.seqfetcher.ASequenceFetcher
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jalview.urls.CustomUrlProvider
jalview.urls.CustomUrlProvider
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jalview.bin.Cache
jalview.bin.Cache
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jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
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jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
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jalview.gui.SeqPanel
jalview.gui.SeqPanel
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jalview.analysis.GeneticCodes
jalview.analysis.GeneticCodes
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jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
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0.04566214.6%
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org.json.simple.JSONObject
org.json.simple.JSONObject
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jalview.urls.IdentifiersUrlProvider
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jalview.util.MapList
jalview.util.MapList
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jalview.util.UrlLink
jalview.util.UrlLink
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jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
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com.stevesoft.pat.RegRes
com.stevesoft.pat.RegRes
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jalview.schemes.ClustalxColourScheme
jalview.schemes.ClustalxColourScheme
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jalview.datamodel.Mapping
jalview.datamodel.Mapping
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jalview.datamodel.ColumnSelection
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jalview.datamodel.HiddenColumnsCursor
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jalview.ws.dbsources.Uniprot
jalview.ws.dbsources.Uniprot
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mc_view.PDBfile
mc_view.PDBfile
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jalview.controller.AlignViewController
jalview.controller.AlignViewController
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
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jalview.bin.Jalview
jalview.bin.Jalview
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jalview.gui.SequenceFetcher
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jalview.bin.argparser.BootstrapArgs
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jalview.ext.ensembl.EnsemblGene
jalview.ext.ensembl.EnsemblGene
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org.json.simple.JSONArray
org.json.simple.JSONArray
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jalview.gui.QuitHandler
jalview.gui.QuitHandler
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jalview.renderer.seqfeatures.FeatureRenderer
jalview.renderer.seqfeatures.FeatureRenderer
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com.stevesoft.pat.CaseMgr
com.stevesoft.pat.CaseMgr
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jalview.schemes.ResidueProperties
jalview.schemes.ResidueProperties
|
0.00105042020.1%
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