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jalview.io.StockholmFile
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org.json.simple.parser.Yytoken
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jalview.util.ColorUtils
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jalview.util.LaunchUtils
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com.stevesoft.pat.Or
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jalview.ws.dbsources.Pfam
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jalview.structure.StructureSelectionManager
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jalview.gui.ProgressBar
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jalview.gui.SeqCanvas
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com.stevesoft.pat.OrMark
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jalview.schemes.ColourSchemes
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jalview.analysis.CrossRef
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com.stevesoft.pat.End
com.stevesoft.pat.End
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jalview.gui.IdPanel
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jalview.schemes.PIDColourScheme
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com.stevesoft.pat.RegOpt
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jalview.ws.dbsources.Pdb
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jalview.analysis.scoremodels.ScoreMatrix
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jalview.gui.ViewSelectionMenu
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jalview.ws.jws2.AAConClient
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jalview.analysis.GeneticCodes
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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jalview.ws.jws1.JPredClient
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jalview.gui.WsParamSetManager
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jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
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org.json.simple.JSONObject
org.json.simple.JSONObject
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jalview.ws.jws1.SeqSearchWSClient
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jalview.ext.ensembl.EnsemblRestClient
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jalview.datamodel.HiddenSequences
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jalview.gui.AlignExportOptions
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jalview.ws.dbsources.Uniprot
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jalview.gui.Preferences
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jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
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jalview.datamodel.HiddenColumnsCursor
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jalview.controller.AlignViewController
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jalview.gui.SequenceFetcher
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jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
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jalview.datamodel.features.SequenceFeatures
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jalview.gui.SeqPanel
jalview.gui.SeqPanel
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jalview.io.SequenceAnnotationReport
jalview.io.SequenceAnnotationReport
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jalview.ws.jws2.RNAalifoldClient
jalview.ws.jws2.RNAalifoldClient
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jalview.datamodel.ColumnSelection
jalview.datamodel.ColumnSelection
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org.json.simple.JSONArray
org.json.simple.JSONArray
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jalview.gui.QuitHandler
jalview.gui.QuitHandler
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jalview.renderer.seqfeatures.FeatureRenderer
jalview.renderer.seqfeatures.FeatureRenderer
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com.stevesoft.pat.RegRes
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jalview.ext.ensembl.EnsemblSeqProxy
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