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org.json.simple.parser.Yylex
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jalview.util.QuickSort
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jalview.datamodel.SequenceFeature
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org.json.simple.parser.JSONParser
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jalview.datamodel.Annotation
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com.stevesoft.pat.Pattern
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jalview.gui.AlignmentPanel
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jalview.gui.AppJmol
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com.stevesoft.pat.Or
com.stevesoft.pat.Or
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ext.vamsas.ServiceHandle
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mc_view.Atom
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jalview.io.IdentifyFile
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0.2771929827.7%
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jalview.util.ColorUtils
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jalview.io.FormatAdapter
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jalview.structure.StructureCommand
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jalview.ws.rest.RestClient
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.schemes.RNAHelicesColour
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jalview.datamodel.Mapping
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jalview.ws.rest.params.AnnotationFile
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jalview.bin.argparser.Arg
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com.stevesoft.pat.parsePerl
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jalview.datamodel.ContactMatrixI
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org.json.simple.parser.Yytoken
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jalview.gui.StructureChooser
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jalview.util.JSONUtils
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com.stevesoft.pat.RegOpt
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jalview.analysis.GeneticCodes
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jalview.util.DBRefUtils
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jalview.gui.WsParamSetManager
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jalview.gui.structurechooser.ThreeDBStructureChooserQuerySource
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org.json.simple.JSONObject
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jalview.util.UrlLink
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com.stevesoft.pat.RegRes
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jalview.util.MappingUtils
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mc_view.PDBfile
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jalview.io.SequenceAnnotationReport
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jalview.gui.SequenceFetcher
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jalview.ext.ensembl.EnsemblGene
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org.json.simple.JSONArray
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jalview.gui.QuitHandler
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jalview.renderer.seqfeatures.FeatureRenderer
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com.stevesoft.pat.CaseMgr
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jalview.schemes.ResidueProperties
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