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jalview.io.DataSourceType
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jalview.io.AlignFile
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org.json.simple.parser.Yylex
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jalview.ws.jws2.JabaWsServerQuery
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jalview.datamodel.CigarArray
jalview.datamodel.CigarArray
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org.json.simple.parser.JSONParser
org.json.simple.parser.JSONParser
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jalview.datamodel.CigarBase
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jalview.io.IdentifyFile
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jalview.datamodel.SeqCigar
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jalview.gui.JalviewChangeSupport
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jalview.gui.JvSwingUtils
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jalview.util.ShortcutKeyMaskExWrapper
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org.json.simple.parser.Yytoken
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jalview.util.ColorUtils
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jalview.util.ChannelProperties
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jalview.util.JSONUtils
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jalview.schemes.RNAHelicesColour
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jalview.schemes.ColourSchemes
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jalview.gui.IdPanel
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jalview.gui.ViewSelectionMenu
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jalview.urls.CustomUrlProvider
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jalview.gui.IdCanvas
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0.0496894425%
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jalview.datamodel.SecondaryStructureCount
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0.0468754.7%
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org.json.simple.JSONObject
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jalview.gui.SeqCanvas
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jalview.util.StringUtils
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jalview.util.DBRefUtils
jalview.util.DBRefUtils
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jalview.renderer.ResidueColourFinder
jalview.renderer.ResidueColourFinder
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jalview.datamodel.HiddenColumns
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jalview.gui.SequenceRenderer
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jalview.gui.AnnotationLabels
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jalview.gui.SeqPanel
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jalview.io.SequenceAnnotationReport
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jalview.bin.Jalview
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jalview.ws.jws2.Jws2Discoverer
jalview.ws.jws2.Jws2Discoverer
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jalview.datamodel.HiddenSequences
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jalview.bin.argparser.BootstrapArgs
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org.json.simple.JSONArray
org.json.simple.JSONArray
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jalview.gui.QuitHandler
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jalview.renderer.seqfeatures.FeatureRenderer
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jalview.analysis.AlignmentUtils
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jalview.datamodel.ColumnSelection
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