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mc_view.Residue
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mc_view.PDBChain
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com.stevesoft.pat.StrPos
com.stevesoft.pat.StrPos
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mc_view.Bond
mc_view.Bond
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com.stevesoft.pat.wrap.StringWrap
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jalview.schemes.PurinePyrimidineColourScheme
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jalview.schemes.NucleotideColourScheme
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com.stevesoft.pat.oneChar
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jalview.io.AlignFile
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jalview.bin.Cache
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jalview.util.ShortcutKeyMaskExWrapper11
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jalview.analysis.AlignSeq
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jalview.renderer.AnnotationRenderer
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jalview.gui.AppJmolBinding
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jalview.util.Comparison
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org.json.simple.parser.Yylex
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jalview.analysis.AAFrequency
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jalview.io.FileLoader
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jalview.datamodel.PDBEntry
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jalview.gui.AlignViewport
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jalview.util.QuickSort
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jalview.util.Format
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jalview.io.FastaFile
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jalview.util.MessageManager
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jalview.jbgui.GStructureChooser.AssociateSeqPanel
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jalview.gui.UserQuestionnaireCheck
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0.349397634.9%
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jalview.datamodel.SequenceFeature
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org.json.simple.parser.JSONParser
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jalview.datamodel.Annotation
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com.stevesoft.pat.Pattern
com.stevesoft.pat.Pattern
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jalview.datamodel.Sequence
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jalview.ws.jws1.Discoverer
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jalview.bin.argparser.ArgValuesMap
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jalview.viewmodel.styles.ViewStyle
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jalview.gui.IdwidthAdjuster
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jalview.datamodel.features.SequenceFeatures
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jalview.ws.rest.RestServiceDescription
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jalview.gui.AlignmentPanel
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jalview.gui.Desktop.MyDesktopPane
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jalview.gui.AppJmol
jalview.gui.AppJmol
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jalview.structure.StructureSelectionManager
jalview.structure.StructureSelectionManager
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com.stevesoft.pat.Or
com.stevesoft.pat.Or
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jalview.structures.models.AAStructureBindingModel
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jalview.ws.jws2.SequenceAnnotationWSClient
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jalview.ws.dbsources.EmblCdsSource
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ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
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jalview.viewmodel.AlignmentViewport
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mc_view.Atom
mc_view.Atom
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jalview.gui.structurechooser.StructureChooserQuerySource
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0.2828%
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jalview.io.IdentifyFile
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jalview.gui.IdCanvas
jalview.gui.IdCanvas
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0.2771929827.7%
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jalview.util.ColorUtils
jalview.util.ColorUtils
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0.2741935627.4%
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jalview.util.Log4j
jalview.util.Log4j
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0.2727272827.3%
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jalview.io.JalviewFileChooser
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jalview.io.FormatAdapter
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jalview.structure.StructureCommand
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jalview.ws.rest.RestClient
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jalview.util.ShortcutKeyMaskExWrapper
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jalview.schemes.RNAHelicesColour
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jalview.datamodel.Mapping
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jalview.ws.rest.params.AnnotationFile
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jalview.bin.argparser.Arg
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com.stevesoft.pat.parsePerl
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jalview.datamodel.ContactMatrixI
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org.json.simple.parser.Yytoken
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jalview.gui.StructureChooser
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jalview.util.JSONUtils
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com.stevesoft.pat.RegOpt
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jalview.analysis.CrossRef
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jalview.util.DBRefUtils
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jalview.gui.WsParamSetManager
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org.json.simple.JSONObject
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jalview.util.UrlLink
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com.stevesoft.pat.RegRes
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jalview.util.MappingUtils
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mc_view.PDBfile
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jalview.gui.SequenceFetcher
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jalview.ext.ensembl.EnsemblGene
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org.json.simple.JSONArray
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jalview.gui.QuitHandler
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jalview.renderer.seqfeatures.FeatureRenderer
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com.stevesoft.pat.CaseMgr
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jalview.schemes.ResidueProperties
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