Build #4

Build: #4 failed Changes by Renia Correya

Build result summary

Details

Completed
Duration
1571 minutes
Labels
None
Agent
Default Agent
Revision
4708e769a97588501d41e43df8f756c176b9421d 4708e769a97588501d41e43df8f756c176b9421d
Failing since
#3 (Changes by Renia Correya)

No failed tests found, a possible compilation error occurred.

Responsible

This build has been failing since #3
No one has taken responsibility

Code commits

Author Commit Message Commit date
Renia Correya Renia Correya 4708e769a97588501d41e43df8f756c176b9421d 4708e769a97588501d41e43df8f756c176b9421d JAL-4386 Comparing secondary structure similarity directly with a basic substitution matrix. Some code refactoring.

JIRA issues

IssueDescriptionStatus
Unknown Issue TypeJAL-4386Could not obtain issue details from JIRA

Error summary for Clover and Tests

The job generated some errors, drill down into the full build log for more details.

WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
WARN: Trying to add a statement but current method is null. Did you put CLOVER:OFF before a method signature and CLOVER:ON inside a method body?
/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB580-JOB1/build/clover/clover-instr/jalview/analysis/AlignmentUtils.java:67: error: cannot find symbol
import jalview.workers.SecondaryStructureConsensusThread;
                      ^
  symbol:   class SecondaryStructureConsensusThread
  location: package jalview.workers
/srv/bamboo/bamboo-home/xml-data/build-dir/196609/JB-GDB580-JOB1/build/clover/clover-instr/jalview/analysis/Finder.java:609: warning: non-varargs call of varargs method with inexact argument type for last parameter;
      __CLR4_4_130gc30gclvo1twnt.R.inc(140771);allFeatures = sf.getAllFeatures(null);
                                                                               ^
  cast to String for a varargs call
  cast to String[] for a non-varargs call and to suppress this warning
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
1 error
1 warning

FAILURE: Build failed with an exception.

* What went wrong:
Execution failed for task ':compileCloverJava'.
> Compilation failed; see the compiler error output for details.

* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.

* Get more help at https://help.gradle.org

BUILD FAILED in 29s