Class jalview.io.IdentifyFileTest

all > jalview.io > IdentifyFileTest
24

tests
0

failures
0

ignored
0.220s

duration
100%

successful

Tests

Test Duration Result
testIdentify[0](examples/example.json, Json) 0.003s passed
testIdentify[10](examples/testdata/test.html, Html) 0.013s passed
testIdentify[11](examples/testdata/test.pileup, Pileup) 0.013s passed
testIdentify[12](examples/testdata/test.blc, BLC) 0.001s passed
testIdentify[13](test/jalview/io/J03321.embl.txt, Embl) 0.001s passed
testIdentify[14](test/jalview/io/J03321.gb, GenBank) 0.001s passed
testIdentify[15](examples/exampleFeatures.txt, Features) 0.002s passed
testIdentify[16](examples/testdata/simpleGff3.gff, Features) 0.001s passed
testIdentify[17](examples/testdata/test.jvp, Jalview) 0.006s passed
testIdentify[18](examples/testdata/test.cif, MMCif) 0.020s passed
testIdentify[19](examples/testdata/cullpdb_pc25_res3.0_R0.3_d150729_chains9361.fasta.15316, Fasta) 0.040s passed
testIdentify[1](examples/plantfdx.fa, Fasta) 0.009s passed
testIdentify[20](resources/scoreModel/pam250.scm, ScoreMatrix) 0s passed
testIdentify[21](resources/scoreModel/blosum80.scm, ScoreMatrix) 0s passed
testIdentify[2](examples/dna_interleaved.phy, Phylip) 0.008s passed
testIdentify[3](examples/2GIS.pdb, PDB) 0.001s passed
testIdentify[4](examples/RF00031_folded.stk, Stockholm) 0.016s passed
testIdentify[5](examples/testdata/test.rnaml, Rnaml) 0.006s passed
testIdentify[6](examples/testdata/test.aln, Clustal) 0.057s passed
testIdentify[7](examples/testdata/test.pfam, Pfam) 0.017s passed
testIdentify[8](examples/testdata/test.msf, MSF) 0.002s passed
testIdentify[9](examples/testdata/test.pir, PIR) 0.001s passed
testIdentify_featureFile 0.001s passed
testLooksLikeFeatureData 0.001s passed

Standard output

File format identified as Json
File format identified as Fasta
File format identified as Phylip
File format identified as PDB
File format identified as Stockholm
File format identified as Rnaml
File format identified as Clustal
File format identified as Pfam
File format identified as MSF
File format identified as PIR
File format identified as Html
File format identified as Pileup
File format identified as BLC
File format identified as Embl
File format identified as GenBank
File format identified as Features
File format identified as Features
File format identified as Jalview
File format identified as MMCif
File format identified as Fasta
File format identified as ScoreMatrix
File format identified as ScoreMatrix
File format identified as Features
File format identified as Features
File format identified as Features