|
jalview.util.LinkedIdentityHashSet
jalview.util.LinkedIdentityHashSet
|
0.7727272577.3%
|
|
|
jalview.datamodel.Mapping.AlignedCodonIterator
jalview.datamodel.Mapping.AlignedCodonIterator
|
0.7575%
|
|
|
jalview.util.LinkedIdentityHashSet.IdentityWrapper
jalview.util.LinkedIdentityHashSet.IdentityWrapper
|
0.7142857371.4%
|
|
|
jalview.datamodel.HiddenCursorPosition
jalview.datamodel.HiddenCursorPosition
|
0.4285714342.9%
|
|
|
jalview.datamodel.AlignedCodon
jalview.datamodel.AlignedCodon
|
0.393939439.4%
|
|
|
jalview.analysis.CodonComparator
jalview.analysis.CodonComparator
|
0.3870967638.7%
|
|
|
jalview.io.FastaFile
jalview.io.FastaFile
|
0.3603603536%
|
|
|
jalview.io.AlignFile
jalview.io.AlignFile
|
0.356164435.6%
|
|
|
jalview.util.Comparison
jalview.util.Comparison
|
0.3188976331.9%
|
|
|
jalview.workers.AlignCalcWorker
jalview.workers.AlignCalcWorker
|
0.1666666716.7%
|
|
|
jalview.ws.jws1.WS1Client
jalview.ws.jws1.WS1Client
|
0.1616%
|
|
|
jalview.io.FormatAdapter
jalview.io.FormatAdapter
|
0.1515%
|
|
|
jalview.io.FileParse
jalview.io.FileParse
|
0.1357340713.6%
|
|
|
jalview.datamodel.AlignedCodonFrame
jalview.datamodel.AlignedCodonFrame
|
0.1160409511.6%
|
|
|
jalview.datamodel.Sequence
jalview.datamodel.Sequence
|
0.0977508659.8%
|
|
|
jalview.workers.AlignCalcManager
jalview.workers.AlignCalcManager
|
0.089285728.9%
|
|
|
jalview.workers.ConservationThread
jalview.workers.ConservationThread
|
0.08620698.6%
|
|
|
jalview.datamodel.Alignment
jalview.datamodel.Alignment
|
0.071691187.2%
|
|
|
jalview.log.JLogger
jalview.log.JLogger
|
0.065934076.6%
|
|
|
jalview.io.AppletFormatAdapter
jalview.io.AppletFormatAdapter
|
0.065217396.5%
|
|
|
ext.vamsas.ServiceHandle
ext.vamsas.ServiceHandle
|
0.061224496.1%
|
|
|
jalview.bin.Console
jalview.bin.Console
|
0.05911335.9%
|
|
|
jalview.analysis.AlignmentUtils
jalview.analysis.AlignmentUtils
|
0.0556338025.6%
|
|
|
jalview.ws.jws1.Discoverer
jalview.ws.jws1.Discoverer
|
0.0512820525.1%
|
|
|
jalview.util.MapList
jalview.util.MapList
|
0.0446153844.5%
|
|
|
jalview.datamodel.Mapping
jalview.datamodel.Mapping
|
0.0432900454.3%
|
|
|
jalview.ws.jws1.JPredClient
jalview.ws.jws1.JPredClient
|
0.0310559013.1%
|
|
|
jalview.io.FileFormat
jalview.io.FileFormat
|
0.0300751893%
|
|
|
jalview.bin.Cache
jalview.bin.Cache
|
0.028925622.9%
|
|
|
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
jalview.datamodel.AlignedCodonFrame.SequenceToSequenceMapping
|
0.0267857152.7%
|
|
|
jalview.util.StringUtils
jalview.util.StringUtils
|
0.0204678362%
|
|
|
jalview.util.Platform
jalview.util.Platform
|
0.0188679251.9%
|
|
|
jalview.datamodel.HiddenColumnsCursor
jalview.datamodel.HiddenColumnsCursor
|
0.0156251.6%
|
|
|
jalview.analysis.AlignSeq
jalview.analysis.AlignSeq
|
0.01275510251.3%
|
|
|
jalview.datamodel.features.SequenceFeatures
jalview.datamodel.features.SequenceFeatures
|
0.0127388541.3%
|
|
|
jalview.gui.AlignFrame
jalview.gui.AlignFrame
|
0.0120856351.2%
|
|
|
jalview.datamodel.HiddenSequences
jalview.datamodel.HiddenSequences
|
0.009132420.9%
|
|
|
jalview.datamodel.HiddenColumns
jalview.datamodel.HiddenColumns
|
0.00235849060.2%
|
|
|
jalview.viewmodel.AlignmentViewport
jalview.viewmodel.AlignmentViewport
|
0.00141342750.1%
|
|
