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Test testIdWidthChanges

Test
testIdWidthChanges 1PASS 13 Nov 18:32:23 1.723
 
testIdWidthChanges
com.stevesoft.pat.patInf   com.stevesoft.pat.patInf 1.0100%
jalview.io.DataSourceType   jalview.io.DataSourceType 1.0100%
jalview.renderer.ContactMapRenderer.Shading   jalview.renderer.ContactMapRenderer.Shading 1.0100%
jalview.renderer.ScaleRenderer.ScaleMark   jalview.renderer.ScaleRenderer.ScaleMark 1.0100%
jalview.ws.WSClient   jalview.ws.WSClient 1.0100%
jalview.ws.SequenceFetcher   jalview.ws.SequenceFetcher 1.0100%
jalview.ws.jws2.jabaws2.Jws2InstanceFactory   jalview.ws.jws2.jabaws2.Jws2InstanceFactory 1.0100%
jalview.datamodel.ResidueCount.SymbolCounts   jalview.datamodel.ResidueCount.SymbolCounts 1.0100%
jalview.structure.StructureImportSettings.TFType   jalview.structure.StructureImportSettings.TFType 1.0100%
jalview.jbgui.GAlignmentPanel   jalview.jbgui.GAlignmentPanel 0.9494%
jalview.io.JalviewFileChooser.RecentlyOpened   jalview.io.JalviewFileChooser.RecentlyOpened 0.990%
jalview.analysis.Conservation   jalview.analysis.Conservation 0.8793103787.9%
jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer   jalview.io.JalviewFileChooser.recentlyOpenedCellRenderer 0.869565287%
jalview.json.binding.biojs.BioJSReleasePojo   jalview.json.binding.biojs.BioJSReleasePojo 0.8461538684.6%
com.stevesoft.pat.Rthings   com.stevesoft.pat.Rthings 0.8461538684.6%
mc_view.Residue   mc_view.Residue 0.8461538684.6%
jalview.datamodel.ContactListImpl   jalview.datamodel.ContactListImpl 0.830508583.1%
jalview.datamodel.annotations.AlphaFoldAnnotationRowBuilder   jalview.datamodel.annotations.AlphaFoldAnnotationRowBuilder 0.8260869482.6%
jalview.renderer.AnnotationRendererFactory   jalview.renderer.AnnotationRendererFactory 0.812581.2%
jalview.util.UrlConstants   jalview.util.UrlConstants 0.880%
jalview.util.LinkedIdentityHashSet   jalview.util.LinkedIdentityHashSet 0.7727272577.3%
jalview.ws.jws2.jabaws2.Jws2Instance   jalview.ws.jws2.jabaws2.Jws2Instance 0.7701149677%
jalview.schemes.ZappoColourScheme   jalview.schemes.ZappoColourScheme 0.7575%
jalview.fts.core.FTSDataColumnPreferences   jalview.fts.core.FTSDataColumnPreferences 0.745762774.6%
jalview.datamodel.Profiles   jalview.datamodel.Profiles 0.7333333573.3%
jalview.gui.FeatureRenderer   jalview.gui.FeatureRenderer 0.7142857371.4%
jalview.util.LinkedIdentityHashSet.IdentityWrapper   jalview.util.LinkedIdentityHashSet.IdentityWrapper 0.7142857371.4%
jalview.datamodel.ContactMapHolder   jalview.datamodel.ContactMapHolder 0.7115384371.2%
jalview.workers.ConsensusThread   jalview.workers.ConsensusThread 0.696969769.7%
jalview.util.MapUtils   jalview.util.MapUtils 0.695652269.6%
jalview.io.JalviewFileFilter   jalview.io.JalviewFileFilter 0.694444469.4%
jalview.renderer.ContactMapRenderer   jalview.renderer.ContactMapRenderer 0.693877669.4%
jalview.json.binding.biojs.BioJSRepositoryPojo   jalview.json.binding.biojs.BioJSRepositoryPojo 0.687568.8%
jalview.ws.dbsources.PfamSeed   jalview.ws.dbsources.PfamSeed 0.636363663.6%
jalview.ws.jws2.JabaWsServerQuery   jalview.ws.jws2.JabaWsServerQuery 0.604166760.4%
jalview.ws.dbsources.EmblSource   jalview.ws.dbsources.EmblSource 0.660%
jalview.util.ParseHtmlBodyAndLinks   jalview.util.ParseHtmlBodyAndLinks 0.594202959.4%
jalview.ws.rest.RestServiceDescription   jalview.ws.rest.RestServiceDescription 0.5959%
jalview.jbgui.GAlignFrame   jalview.jbgui.GAlignFrame 0.581220758.1%
jalview.workers.ConservationThread   jalview.workers.ConservationThread 0.568965556.9%
jalview.renderer.ScaleRenderer   jalview.renderer.ScaleRenderer 0.5656%
jalview.datamodel.ContactRange   jalview.datamodel.ContactRange 0.555555655.6%
jalview.gui.AssociatePdbFileWithSeq   jalview.gui.AssociatePdbFileWithSeq 0.5555%
jalview.ws.dbsources.PfamFull   jalview.ws.dbsources.PfamFull 0.5384615753.8%
mc_view.PDBChain   mc_view.PDBChain 0.5357142753.6%
jalview.ext.jmol.JmolParser   jalview.ext.jmol.JmolParser 0.5253333452.5%
com.stevesoft.pat.StrPos   com.stevesoft.pat.StrPos 0.523255852.3%
jalview.ws.uimodel.AlignAnalysisUIText   jalview.ws.uimodel.AlignAnalysisUIText 0.512195151.2%
jalview.workers.AlignCalcManager   jalview.workers.AlignCalcManager 0.511904851.2%
ext.vamsas.ServiceHandle   ext.vamsas.ServiceHandle 0.510204151%
jalview.ws.datamodel.alphafold.MappableContactMatrix   jalview.ws.datamodel.alphafold.MappableContactMatrix 0.5062761350.6%
jalview.jbgui.GStructureChooser   jalview.jbgui.GStructureChooser 0.5024752650.2%
jalview.gui.JalviewChangeSupport   jalview.gui.JalviewChangeSupport 0.550%
jalview.viewmodel.ViewportProperties   jalview.viewmodel.ViewportProperties 0.550%
mc_view.Bond   mc_view.Bond 0.550%
jalview.datamodel.GroupSetHolder   jalview.datamodel.GroupSetHolder 0.550%
jalview.schemes.TaylorColourScheme   jalview.schemes.TaylorColourScheme 0.550%
jalview.schemes.FlowerColourScheme   jalview.schemes.FlowerColourScheme 0.550%
jalview.schemes.NucleotideAmbiguityColourScheme   jalview.schemes.NucleotideAmbiguityColourScheme 0.550%
jalview.schemes.PurinePyrimidineColourScheme   jalview.schemes.PurinePyrimidineColourScheme 0.550%
jalview.schemes.NucleotideColourScheme   jalview.schemes.NucleotideColourScheme 0.550%
jalview.schemes.BlossomColourScheme   jalview.schemes.BlossomColourScheme 0.550%
jalview.schemes.SunsetColourScheme   jalview.schemes.SunsetColourScheme 0.550%
jalview.schemes.OceanColourScheme   jalview.schemes.OceanColourScheme 0.550%
jalview.io.BioJsHTMLOutput   jalview.io.BioJsHTMLOutput 0.46446.4%
jalview.io.AlignFile   jalview.io.AlignFile 0.4452054844.5%
jalview.ws.jws2.MsaWSClient   jalview.ws.jws2.MsaWSClient 0.4429530244.3%
jalview.io.FileLoader   jalview.io.FileLoader 0.438127143.8%
jalview.gui.ColourMenuHelper   jalview.gui.ColourMenuHelper 0.4322033843.2%
jalview.ws.utils.UrlDownloadClient   jalview.ws.utils.UrlDownloadClient 0.4285714342.9%
jalview.ws.dbsources.EmblCdsSource   jalview.ws.dbsources.EmblCdsSource 0.4285714342.9%
jalview.ws.dbsources.RfamSeed   jalview.ws.dbsources.RfamSeed 0.4285714342.9%
jalview.datamodel.HiddenCursorPosition   jalview.datamodel.HiddenCursorPosition 0.4285714342.9%
jalview.schemes.ResidueColourScheme   jalview.schemes.ResidueColourScheme 0.4285714342.9%
jalview.io.StructureFile   jalview.io.StructureFile 0.42790742.8%
jalview.ws.jws2.Jws2Discoverer   jalview.ws.jws2.Jws2Discoverer 0.4277227842.8%
jalview.urls.UrlProvider   jalview.urls.UrlProvider 0.4257425742.6%
jalview.analysis.AlignSeq   jalview.analysis.AlignSeq 0.4256410342.6%
jalview.datamodel.FloatContactMatrix   jalview.datamodel.FloatContactMatrix 0.4242%
jalview.util.ShortcutKeyMaskExWrapper11   jalview.util.ShortcutKeyMaskExWrapper11 0.4166666641.7%
jalview.datamodel.annotations.AnnotationRowBuilder   jalview.datamodel.annotations.AnnotationRowBuilder 0.4102564241%
jalview.ws.jws2.JabaPreset   jalview.ws.jws2.JabaPreset 0.409090940.9%
jalview.gui.SequenceRenderer   jalview.gui.SequenceRenderer 0.4086538640.9%
jalview.io.FileFormats   jalview.io.FileFormats 0.440%
jalview.schemes.HydrophobicColourScheme   jalview.schemes.HydrophobicColourScheme 0.440%
jalview.schemes.HelixColourScheme   jalview.schemes.HelixColourScheme 0.440%
jalview.schemes.TurnColourScheme   jalview.schemes.TurnColourScheme 0.440%
jalview.schemes.StrandColourScheme   jalview.schemes.StrandColourScheme 0.440%
jalview.schemes.BuriedColourScheme   jalview.schemes.BuriedColourScheme 0.440%
org.json.simple.parser.Yylex   org.json.simple.parser.Yylex 0.3980891739.8%
jalview.urls.CustomUrlProvider   jalview.urls.CustomUrlProvider 0.3924050639.2%
jalview.datamodel.ResidueCount   jalview.datamodel.ResidueCount 0.389090938.9%
jalview.log.JalviewAppender   jalview.log.JalviewAppender 0.388888938.9%
jalview.ws.rest.params.Alignment   jalview.ws.rest.params.Alignment 0.384615438.5%
jalview.datamodel.features.FeatureAttributes.AttributeData   jalview.datamodel.features.FeatureAttributes.AttributeData 0.3829787438.3%
jalview.renderer.ContactGeometry   jalview.renderer.ContactGeometry 0.37537.5%
jalview.datamodel.Profile   jalview.datamodel.Profile 0.37537.5%
jalview.datamodel.AlignmentAnnotation   jalview.datamodel.AlignmentAnnotation 0.3737537.4%
jalview.fts.core.FTSRestClient   jalview.fts.core.FTSRestClient 0.3706563737.1%
jalview.util.Format   jalview.util.Format 0.3685300436.9%
jalview.urls.UrlProviderImpl   jalview.urls.UrlProviderImpl 0.3658536736.6%
jalview.urls.desktop.DesktopUrlProviderFactory   jalview.urls.desktop.DesktopUrlProviderFactory 0.3636363736.4%
jalview.ws.datamodel.alphafold.PAEContactMatrix   jalview.ws.datamodel.alphafold.PAEContactMatrix 0.3628318636.3%
jalview.io.FastaFile   jalview.io.FastaFile 0.3603603536%
jalview.renderer.ContactGeometry.contactInterval   jalview.renderer.ContactGeometry.contactInterval 0.3571428735.7%
jalview.util.MessageManager   jalview.util.MessageManager 0.3571428735.7%
jalview.jbgui.GStructureChooser.AssociateSeqPanel   jalview.jbgui.GStructureChooser.AssociateSeqPanel 0.352941235.3%
jalview.renderer.AnnotationRenderer   jalview.renderer.AnnotationRenderer 0.3505434735.1%
jalview.util.Comparison   jalview.util.Comparison 0.350393735%
jalview.datamodel.PDBEntry   jalview.datamodel.PDBEntry 0.3480176334.8%
jalview.datamodel.Annotation   jalview.datamodel.Annotation 0.3428571534.3%
org.json.simple.parser.JSONParser   org.json.simple.parser.JSONParser 0.3292079332.9%
jalview.gui.IdwidthAdjuster   jalview.gui.IdwidthAdjuster 0.3289473732.9%
jalview.viewmodel.styles.ViewStyle   jalview.viewmodel.styles.ViewStyle 0.3242187532.4%
com.stevesoft.pat.oneChar   com.stevesoft.pat.oneChar 0.3142857331.4%
jalview.viewmodel.ViewportRanges   jalview.viewmodel.ViewportRanges 0.3135313431.4%
jalview.datamodel.Sequence   jalview.datamodel.Sequence 0.307093430.7%
jalview.gui.AlignViewport   jalview.gui.AlignViewport 0.3036529730.4%
jalview.gui.AlignmentPanel   jalview.gui.AlignmentPanel 0.3003533530%
jalview.ws.jws2.SequenceAnnotationWSClient   jalview.ws.jws2.SequenceAnnotationWSClient 0.2903225729%
jalview.renderer.ResidueColourFinder   jalview.renderer.ResidueColourFinder 0.285714328.6%
jalview.schemes.JalviewColourScheme   jalview.schemes.JalviewColourScheme 0.285714328.6%
mc_view.Atom   mc_view.Atom 0.282051328.2%
jalview.ws.rest.InputType   jalview.ws.rest.InputType 0.2803738428%
jalview.gui.structurechooser.StructureChooserQuerySource   jalview.gui.structurechooser.StructureChooserQuerySource 0.2828%
jalview.io.IdentifyFile   jalview.io.IdentifyFile 0.279365127.9%
jalview.ws.jws1.Discoverer   jalview.ws.jws1.Discoverer 0.2756410227.6%
jalview.gui.IdCanvas   jalview.gui.IdCanvas 0.273684227.4%
jalview.datamodel.features.FeatureAttributes   jalview.datamodel.features.FeatureAttributes 0.2713178427.1%
jalview.io.FileParse   jalview.io.FileParse 0.2674094726.7%
jalview.gui.JvSwingUtils   jalview.gui.JvSwingUtils 0.258503425.9%
jalview.ws.rest.RestClient   jalview.ws.rest.RestClient 0.2564102725.6%
jalview.util.UrlLink   jalview.util.UrlLink 0.2537878825.4%
jalview.util.HttpUtils   jalview.util.HttpUtils 0.2514619825.1%
jalview.ext.ensembl.EnsemblSequenceFetcher   jalview.ext.ensembl.EnsemblSequenceFetcher 0.2525%
jalview.ws.jws1.WS1Client   jalview.ws.jws1.WS1Client 0.2424%
jalview.structure.StructureSelectionManager   jalview.structure.StructureSelectionManager 0.2424%
jalview.datamodel.SequenceCursor   jalview.datamodel.SequenceCursor 0.2333333323.3%
jalview.viewmodel.AlignmentViewport   jalview.viewmodel.AlignmentViewport 0.2329286823.3%
jalview.gui.PaintRefresher   jalview.gui.PaintRefresher 0.2323943723.2%
com.stevesoft.pat.Range   com.stevesoft.pat.Range 0.2272727322.7%
com.stevesoft.pat.Bracket   com.stevesoft.pat.Bracket 0.22522.5%
jalview.util.MapList   jalview.util.MapList 0.2242990622.4%
jalview.ws.jws2.Jws2Client   jalview.ws.jws2.Jws2Client 0.2228915722.3%
jalview.datamodel.features.FeatureStore   jalview.datamodel.features.FeatureStore 0.220543822.1%
jalview.gui.PromptUserConfig   jalview.gui.PromptUserConfig 0.215909121.6%
jalview.analysis.AAFrequency   jalview.analysis.AAFrequency 0.2151898721.5%
jalview.gui.ScalePanel   jalview.gui.ScalePanel 0.2148437521.5%
jalview.gui.AnnotationLabels   jalview.gui.AnnotationLabels 0.2140391321.4%
jalview.util.QuickSort   jalview.util.QuickSort 0.2135922321.4%
jalview.analysis.AnnotationSorter   jalview.analysis.AnnotationSorter 0.2118226621.2%
jalview.ws.rest.params.SeqGroupIndexVector   jalview.ws.rest.params.SeqGroupIndexVector 0.2116788321.2%
jalview.analysis.scoremodels.ScoreModels   jalview.analysis.scoremodels.ScoreModels 0.2115384621.2%
com.stevesoft.pat.Regex   com.stevesoft.pat.Regex 0.2072727220.7%
jalview.urls.UrlLinkDisplay   jalview.urls.UrlLinkDisplay 0.2051282120.5%
jalview.datamodel.SequenceFeature   jalview.datamodel.SequenceFeature 0.2014388420.1%
jalview.datamodel.features.SequenceFeatures   jalview.datamodel.features.SequenceFeatures 0.191082819.1%
jalview.fts.core.FTSDataColumnPreferences.FTSDataColumnPrefsTableModel   jalview.fts.core.FTSDataColumnPreferences.FTSDataColumnPrefsTableModel 0.1857142918.6%
com.stevesoft.pat.Pattern   com.stevesoft.pat.Pattern 0.1805555518.1%
com.stevesoft.pat.patInt   com.stevesoft.pat.patInt 0.17517.5%
jalview.io.JalviewFileChooser   jalview.io.JalviewFileChooser 0.1743869217.4%
jalview.urls.IdentifiersUrlProvider   jalview.urls.IdentifiersUrlProvider 0.1743119217.4%
jalview.ws.dbsources.Xfam   jalview.ws.dbsources.Xfam 0.1739130517.4%
jalview.schemes.IdColourScheme   jalview.schemes.IdColourScheme 0.1739130517.4%
jalview.util.StringUtils   jalview.util.StringUtils 0.1723076917.2%
jalview.util.ColorUtils   jalview.util.ColorUtils 0.1720430117.2%
jalview.urls.UrlLinkTableModel   jalview.urls.UrlLinkTableModel 0.1686746916.9%
jalview.datamodel.Alignment   jalview.datamodel.Alignment 0.1675977716.8%
jalview.jbgui.GStructureChooser.CustomComboSeparatorsRenderer   jalview.jbgui.GStructureChooser.CustomComboSeparatorsRenderer 0.1666666716.7%
jalview.gui.Desktop.MyDesktopManager   jalview.gui.Desktop.MyDesktopManager 0.1555555615.6%
jalview.ws.seqfetcher.ASequenceFetcher   jalview.ws.seqfetcher.ASequenceFetcher 0.1511111115.1%
jalview.schemes.TCoffeeColourScheme   jalview.schemes.TCoffeeColourScheme 0.1475409914.8%
jalview.ws.jws2.JabaParamStore   jalview.ws.jws2.JabaParamStore 0.1458333314.6%
jalview.log.JLogger   jalview.log.JLogger 0.1428571514.3%
jalview.gui.Desktop.MyDesktopPane   jalview.gui.Desktop.MyDesktopPane 0.1428571514.3%
jalview.io.AppletFormatAdapter   jalview.io.AppletFormatAdapter 0.1428571514.3%
jalview.ws.dbsources.EBIAlfaFold   jalview.ws.dbsources.EBIAlfaFold 0.1417910514.2%
jalview.fts.service.threedbeacons.TDBeaconsFTSRestClient   jalview.fts.service.threedbeacons.TDBeaconsFTSRestClient 0.137513.8%
jalview.bin.Console   jalview.bin.Console 0.1330049213.3%
jalview.datamodel.GroupSet   jalview.datamodel.GroupSet 0.1293103412.9%
jalview.gui.AnnotationPanel   jalview.gui.AnnotationPanel 0.1271008412.7%
jalview.ws.dbsources.Rfam   jalview.ws.dbsources.Rfam 0.12512.5%
jalview.gui.AlignFrame   jalview.gui.AlignFrame 0.1228950212.3%
jalview.util.Platform   jalview.util.Platform 0.1226415112.3%
jalview.io.FormatAdapter   jalview.io.FormatAdapter 0.1212%
jalview.schemes.Blosum62ColourScheme   jalview.schemes.Blosum62ColourScheme 0.1176470611.8%
jalview.util.ShortcutKeyMaskExWrapper   jalview.util.ShortcutKeyMaskExWrapper 0.1111111111.1%
jalview.ws.sifts.SiftsSettings   jalview.ws.sifts.SiftsSettings 0.1111111111.1%
jalview.schemes.ColourSchemeProperty   jalview.schemes.ColourSchemeProperty 0.1111111111.1%
jalview.io.FileFormat   jalview.io.FileFormat 0.1085271310.9%
jalview.log.JLoggerLog4j   jalview.log.JLoggerLog4j 0.10679611610.7%
jalview.datamodel.Mapping   jalview.datamodel.Mapping 0.10389610410.4%
jalview.analysis.scoremodels.ScoreMatrix   jalview.analysis.scoremodels.ScoreMatrix 0.1028806610.3%
jalview.ws.rest.params.AnnotationFile   jalview.ws.rest.params.AnnotationFile 0.10256410410.3%
com.stevesoft.pat.parsePerl   com.stevesoft.pat.parsePerl 0.098639469.9%
jalview.datamodel.ContactMatrixI   jalview.datamodel.ContactMatrixI 0.0970873769.7%
org.json.simple.parser.Yytoken   org.json.simple.parser.Yytoken 0.096774199.7%
jalview.fts.service.pdb.PDBFTSRestClient   jalview.fts.service.pdb.PDBFTSRestClient 0.096069879.6%
jalview.workers.AlignCalcWorker   jalview.workers.AlignCalcWorker 0.09523819.5%
jalview.gui.Desktop   jalview.gui.Desktop 0.0951025049.5%
jalview.gui.SeqCanvas   jalview.gui.SeqCanvas 0.093186379.3%
jalview.util.JSONUtils   jalview.util.JSONUtils 0.090909099.1%
com.stevesoft.pat.Or   com.stevesoft.pat.Or 0.089743599%
jalview.ws.dbsources.Pfam   jalview.ws.dbsources.Pfam 0.086956528.7%
jalview.util.CaseInsensitiveString   jalview.util.CaseInsensitiveString 0.086956528.7%
jalview.gui.Console   jalview.gui.Console 0.082568818.3%
jalview.schemes.RNAHelicesColour   jalview.schemes.RNAHelicesColour 0.082191788.2%
jalview.gui.ProgressBar   jalview.gui.ProgressBar 0.081300818.1%
jalview.ws.seqfetcher.DbSourceProxyImpl   jalview.ws.seqfetcher.DbSourceProxyImpl 0.081081088.1%
com.stevesoft.pat.OrMark   com.stevesoft.pat.OrMark 0.0757.5%
jalview.datamodel.ColumnSelection.IntList   jalview.datamodel.ColumnSelection.IntList 0.074766357.5%
com.stevesoft.pat.FastMulti   com.stevesoft.pat.FastMulti 0.0740740757.4%
jalview.schemes.ColourSchemes   jalview.schemes.ColourSchemes 0.070175447%
jalview.gui.IdPanel   jalview.gui.IdPanel 0.067264576.7%
jalview.schemes.PIDColourScheme   jalview.schemes.PIDColourScheme 0.066666676.7%
com.stevesoft.pat.RegOpt   com.stevesoft.pat.RegOpt 0.06474826.5%
jalview.renderer.ResidueShader   jalview.renderer.ResidueShader 0.064285726.4%
jalview.ws.dbsources.Pdb   jalview.ws.dbsources.Pdb 0.063829796.4%
jalview.analysis.CrossRef   jalview.analysis.CrossRef 0.063524596.4%
jalview.gui.StructureChooser   jalview.gui.StructureChooser 0.063291146.3%
jalview.datamodel.DBRefEntry   jalview.datamodel.DBRefEntry 0.0616438356.2%
jalview.gui.ViewSelectionMenu   jalview.gui.ViewSelectionMenu 0.059405945.9%
jalview.ws.jws2.AAConClient   jalview.ws.jws2.AAConClient 0.0571428575.7%
jalview.structure.StructureImportSettings   jalview.structure.StructureImportSettings 0.0571428575.7%
jalview.bin.Cache   jalview.bin.Cache 0.0509641885.1%
jalview.analysis.GeneticCodes   jalview.analysis.GeneticCodes 0.0496894425%
jalview.structure.StructureMapping   jalview.structure.StructureMapping 0.0466321264.7%
jalview.util.DBRefUtils   jalview.util.DBRefUtils 0.045317224.5%
jalview.datamodel.ColumnSelection   jalview.datamodel.ColumnSelection 0.044673544.5%
jalview.ws.jws1.JPredClient   jalview.ws.jws1.JPredClient 0.043478264.3%
jalview.gui.WsParamSetManager   jalview.gui.WsParamSetManager 0.0429447854.3%
jalview.analysis.AlignmentUtils   jalview.analysis.AlignmentUtils 0.0416666684.2%
jalview.gui.structurechooser.ThreeDBStructureChooserQuerySource   jalview.gui.structurechooser.ThreeDBStructureChooserQuerySource 0.0390879473.9%
org.json.simple.JSONObject   org.json.simple.JSONObject 0.037735853.8%
jalview.datamodel.HiddenColumns   jalview.datamodel.HiddenColumns 0.037735853.8%
jalview.ws.jws1.SeqSearchWSClient   jalview.ws.jws1.SeqSearchWSClient 0.029629633%
jalview.ext.ensembl.EnsemblRestClient   jalview.ext.ensembl.EnsemblRestClient 0.0283018872.8%
jalview.datamodel.HiddenSequences   jalview.datamodel.HiddenSequences 0.027397262.7%
jalview.ws.jws1.MsaWSClient   jalview.ws.jws1.MsaWSClient 0.026315792.6%
jalview.util.MappingUtils   jalview.util.MappingUtils 0.0237068962.4%
jalview.ws.dbsources.Uniprot   jalview.ws.dbsources.Uniprot 0.0233463032.3%
jalview.gui.structurechooser.PDBStructureChooserQuerySource   jalview.gui.structurechooser.PDBStructureChooserQuerySource 0.017751481.8%
jalview.schemes.ClustalxColourScheme   jalview.schemes.ClustalxColourScheme 0.0169491531.7%
jalview.ext.ensembl.EnsemblGene   jalview.ext.ensembl.EnsemblGene 0.016326531.6%
jalview.datamodel.HiddenColumnsCursor   jalview.datamodel.HiddenColumnsCursor 0.0156251.6%
jalview.gui.StructureViewer   jalview.gui.StructureViewer 0.0148514851.5%
jalview.controller.AlignViewController   jalview.controller.AlignViewController 0.0136518771.4%
jalview.gui.SequenceFetcher   jalview.gui.SequenceFetcher 0.0133928571.3%
jalview.datamodel.SearchResults   jalview.datamodel.SearchResults 0.0128205131.3%
jalview.gui.SeqPanel   jalview.gui.SeqPanel 0.0125412541.3%
jalview.io.SequenceAnnotationReport   jalview.io.SequenceAnnotationReport 0.0122699381.2%
jalview.bin.Jalview   jalview.bin.Jalview 0.0117328521.2%
jalview.ws.jws2.RNAalifoldClient   jalview.ws.jws2.RNAalifoldClient 0.0114285711.1%
jalview.bin.argparser.BootstrapArgs   jalview.bin.argparser.BootstrapArgs 0.0082644620.8%
org.json.simple.JSONArray   org.json.simple.JSONArray 0.0080645160.8%
jalview.renderer.seqfeatures.FeatureRenderer   jalview.renderer.seqfeatures.FeatureRenderer 0.007547170.8%
com.stevesoft.pat.RegRes   com.stevesoft.pat.RegRes 0.0072463770.7%
jalview.gui.QuitHandler   jalview.gui.QuitHandler 0.00722021660.7%
jalview.ext.ensembl.EnsemblSeqProxy   jalview.ext.ensembl.EnsemblSeqProxy 0.00584795330.6%
jalview.gui.Preferences   jalview.gui.Preferences 0.0042553190.4%
jalview.ext.jmol.JalviewJmolBinding   jalview.ext.jmol.JalviewJmolBinding 0.0040485830.4%
com.stevesoft.pat.CaseMgr   com.stevesoft.pat.CaseMgr 0.00278551530.3%
jalview.schemes.ResidueProperties   jalview.schemes.ResidueProperties 0.00105042020.1%