Jim Procter <j.procter@dundee.ac.uk>: Author Summary

Builds triggered by Jim Procter <j.procter@dundee.ac.uk>

Builds triggered by an author are those builds which contains changes committed by the author.
11
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11 (100%)

Breakages and fixes

Broken means the build has failed but the previous build was successful.
Fixed means that the build was successful but the previous build has failed.
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Build Completed Code commits Tests
JB › GPC › #163 5 hours ago
JAL-4065 release notes for JAL-4073 JAL-4074
JAL-4073 Pfam retrieval now works via a template including $PFAMID$ and $ALTYPE$ (full, seed, etc). Also changed name of PFAM_BASEURL_KEY to PFAM_INTERPRO_URL_TEMPLATE to avoid misconfiguration
Patch for JAL-4074 - any content ending in ‘gzip’ recognised as a gzipped stream to decompress
JAL-1551 formatting
Testless build
JB › GDB › #436 5 hours ago
JAL-4073 Pfam retrieval now works via a template including $PFAMID$ and $ALTYPE$ (full, seed, etc). Also changed name of PFAM_BASEURL_KEY to PFAM_INTERPRO_URL_TEMPLATE to avoid misconfiguration
Patch for JAL-4074 - any content ending in ‘gzip’ recognised as a gzipped stream to decompress
JAL-4065 release notes for JAL-4073 JAL-4074
JAL-1551 formatting
1447 passed
JB › GJB › #230 5 hours ago
JAL-4073 Pfam retrieval now works via a template including $PFAMID$ and $ALTYPE$ (full, seed, etc). Also changed name of PFAM_BASEURL_KEY to PFAM_INTERPRO_URL_TEMPLATE to avoid misconfiguration
Patch for JAL-4074 - any content ending in ‘gzip’ recognised as a gzipped stream to decompress
JAL-4065 release notes for JAL-4073 JAL-4074
JAL-1551 formatting
Testless build
JB › GDC › #130 2 weeks ago
JAL-4065 - new release notes featuring JAL-3612 fix
JAL-4065 release notes for JAL-4014 and JAL-4063 in 2.11.2.5
Merge branch 'bug/JAL-3612_overviewFeatureOrdering' into develop
Testless build
JB › GPC › #162 3 weeks ago
JAL-4065 release notes for JAL-4014 and JAL-4063 in 2.11.2.5
Testless build
JB › GDB › #435 3 weeks ago
JAL-4065 release notes for JAL-4014 and JAL-4063 in 2.11.2.5
1447 passed
JB › GJB › #229 3 weeks ago
JAL-4065 release notes for JAL-4014 and JAL-4063 in 2.11.2.5
Testless build
JB › GJ2B › #5 3 months ago
JAL-4026 always wait 50ms before checking if the calculation worker is still running so it has time to start.
Testless build
JB › GJ2B › #4 3 months ago
JAL-4026 update the viewport’s wrapped width after calculating it
Testless build
JB › GDI › #9 4 months ago
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3085 update tests and mock responses, new P0dtd1 testcase
JAL-3746 release note for JAL-3618 Vaqua config so app directories can be opened
Merge branch 'task/JAL-3992_update_docs' into bug/JAL-3365_extendedDSSP_via_stockholm
JAL-3983 known issue note for JAL-3984
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3976 fix mock PDBFTS query & responses
Merge branch 'bug/JAL-360+JAL-3975_keyboard_input_lost_after_dialog' into develop
JAL-3985 formatting
JAL-3108 updated Ensembl client and model species names
JAL-3980 defensive copy - inefficient but fixes bug
JAL-3438 spotless for 2.11.2.0
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3976 update tests
Merge branch 'benreview/JAL-3691_for_2_11_2_getdownrebuilds' into develop
Merge branch 'bug/JAL-3997_NPE_in_wrapped_mode' into develop
JAL-3990 release notes for 2.11.2.1 patch release
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3746 apply copyright to tests
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3992 fix path
Merge branch 'spike/try_spotless_JAL-3438' into develop
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3990 release notes and what’s new
Release notes for JAL—3728 - waiting for ben to sign off or leave issue open
Merge branch 'develop' into releases/Release_2_11_2_Branch
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3208 release notes and docs for setprop
JAL-3981 strategic newlines to help speed up Java's html parser
JAL-4012 JAL-4008 release notes for Jalview 2.11.2.3
JAL-3997 check for tooltip being null before checking equivalence to last tooltip string
JAL-3746 apply copyright to source
JAL-3608 JAL-3830  simplified command line docs a bit
JAL-3746 JAL-3841 new README and finalising 2.11.2.0 release notes
JAL-3990 gradle spotlessApply
JAL-3746 release note for JAL-3907 building Jalview with j17
Merge branch 'bug/JAL-3962_awt_dll_problem' into develop
JAL-3365 expand range of allowed DSSP secondary structure symbols in Stockholm files
JAL-3746 JAL-3841 fix README typo
JAL-3746 new release date for 2.11.2
JAL-3746 structure mapping preference docs for JAL-3817
Merge branch 'develop' into releases/Release_2_11_2_Branch
Merge branch 'develop' into releases/Release_2_11_2_Branch
Merge branch 'bug/JAL-3980_JAL-3981_tooltips_sequence_details' into develop
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-3973 exclude the original RELEASE file so gradle doesn't complain of duplicate entries in the tarball
Merge branch 'develop' into releases/Release_2_11_2_Branch
Merge branch 'bug/JAL-3103_browser_launcher_problems_macos_and_linux' into develop
JAL-3983 release note for JAL-3985
JAL-360 JAL-3975 update parent for text colour dialog - doesn't seem to help but we live in hope..
JAL-3976 skip entries with null values when analyzing
JAL-3608 JAL-3830 tweaked the what’s new text and updated helpTOC
JAL-3981 patch tests and remove errant imports
JAL-3746 JAL-3103 java.awt.Desktop.showURL method mechanism release notes
JAL-3685 - two single quotes when replacements are present in i18n message
JAL-3647 release notes for hdpi/laf scaling JAL-3608 JAL-3609 JAL-3552
JAL-3992 bump version and report updates in 2.11.2.2 release notes
Merge branch 'develop' into releases/Release_2_11_2_Branch
Merge branch 'doc/JAL-3608+JAL-3830_added_to_help_docs' into develop
JAL-3983 release notes for JAL-3975 and known issue note for JAL-3984
Merge branch 'bug/JAL-3973_source_tarball_not_building' into develop
Merge branch 'bug/JAL-3085_avoid_414_error_for_PDBFTS' into develop
Merge branch 'patch/JAL-3976_3dbeaconsnull' into develop
JAL-3983 update release notes for JAL-3973
JAL-3981 Additional line breaks - sort of helps
JAL-3647 release notes for JAL-1842 JAL-3509 JAL-3881, JAL-3884 JAL-3632 JAL-3633 and report JAL-3764 as a known issue
JAL-3746 more docs tweaking and release notes
Merge branch 'patch/JAL-4008_jabaws_2_2_1_patch' into doc/release_2_11_2_3
JAL-3594 release notes and mention jalview develop app in release notes
JAL-3746 release notes for JAL-3867
Merge branch 'develop' into releases/Release_2_11_2_Branch
JAL-4008 update jabaws client to 2.2.1 - definitely no log4j references !
JAL-3992 shift+arrow to jump to next gap/residue in cursor/keyboard editing mode
JAL-3985 split PDB id queries into multiple queries so server doesn’t 414
Merge branch 'bug/JAL-3365_extendedDSSP_via_stockholm' into develop
JAL-3983 release 2.11.2.1 date and release notes
Testless build
Build Completed Code commits Tests
Build Completed Code commits Tests